STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0771Peptidoglycan glycosyltransferase. (572 aa)    
Predicted Functional Partners:
OSCT_1592
Cell cycle protein; Belongs to the SEDS family.
 0.991
OSCT_2805
Cell cycle protein; Belongs to the SEDS family.
 0.978
OSCT_2780
Cell division protein FtsW; Belongs to the SEDS family.
 0.953
OSCT_2786
Polypeptide-transport-associated domain-containing protein; Essential cell division protein.
 
 
 0.854
OSCT_0250
Peptidoglycan glycosyltransferase.
  
  
 
0.839
OSCT_2775
Peptidoglycan glycosyltransferase.
  
  
 
0.818
OSCT_0620
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
  
 0.802
OSCT_0772
Peptidase S41.
  
   0.796
OSCT_3190
NLP/P60 protein.
 
 
 0.787
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.728
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.