Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
OSCT_0780Transcriptional activator domain protein. (1090 aa)    
Predicted Functional Partners:
OSCT_0525
Aminotransferase class I and II.
    
   0.734
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.669
OSCT_0955
ABC-type dipeptide transport system periplasmic component-like protein.
  
     0.582
OSCT_0507
Beta-ketoacyl synthase.
 
   
 0.579
OSCT_1818
Hypothetical protein.
  
     0.566
OSCT_2096
Hypothetical protein.
  
     0.562
OSCT_0779
Hypothetical protein.
       0.549
OSCT_1315
Hypothetical protein.
  
     0.539
OSCT_0781
Hypothetical protein.
       0.536
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.532
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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