STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0788Hypothetical protein. (74 aa)    
Predicted Functional Partners:
OSCT_0789
Hypothetical protein.
 
 
 0.998
OSCT_0787
Helicase domain-containing protein.
 
     0.764
OSCT_0995
Hypothetical protein.
  
     0.736
OSCT_1879
Hypothetical protein.
  
     0.710
OSCT_1829
Protein of unknown function DUF497.
 
   
 0.708
OSCT_1836
Hypothetical protein.
  
     0.703
OSCT_0786
Hypothetical protein.
 
     0.701
OSCT_1878
ATPase.
  
     0.660
OSCT_2086
PilT domain-containing protein.
  
     0.624
OSCT_1752
Hypothetical protein.
  
   
 0.587
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.