STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0789Hypothetical protein. (72 aa)    
Predicted Functional Partners:
OSCT_0788
Hypothetical protein.
 
 
 0.998
OSCT_0787
Helicase domain-containing protein.
 
     0.753
OSCT_1829
Protein of unknown function DUF497.
  
   
 0.752
OSCT_3013
Hypothetical protein.
  
     0.717
OSCT_0995
Hypothetical protein.
  
     0.702
OSCT_2086
PilT domain-containing protein.
  
     0.680
OSCT_0786
Hypothetical protein.
 
     0.599
vapC-3
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.591
OSCT_1752
Hypothetical protein.
  
   
 0.583
OSCT_3172
PemK-like protein; Toxic component of a type II toxin-antitoxin (TA) system.
  
   
 0.535
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.