Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
OSCT_0796FAD linked oxidase domain protein. (420 aa)    
Predicted Functional Partners:
OSCT_0797
FAD linked oxidase domain protein.
  
 
0.981
OSCT_2717
Hypothetical protein.
 
 0.954
OSCT_2715
D-lactate dehydrogenase (cytochrome).
 
  
 
0.931
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.861
OSCT_2716
FAD linked oxidase domain-containing protein.
  
  
 
0.811
OSCT_1623
Malate synthase; Belongs to the malate synthase family.
  
 
 0.795
OSCT_0110
Hypothetical protein.
    
 0.778
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.776
OSCT_1622
Isocitrate lyase.
     
 0.768
OSCT_0733
Putative aminotransferase.
    
  0.678
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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