STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0797FAD linked oxidase domain protein. (482 aa)    
Predicted Functional Partners:
OSCT_0796
FAD linked oxidase domain protein.
  
 
0.981
OSCT_2717
Hypothetical protein.
 
 0.981
OSCT_2316
Sn-glycerol-3-phosphate dehydrogenase subunit C.
 
 0.932
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.917
OSCT_2716
FAD linked oxidase domain-containing protein.
 
  
 
0.849
OSCT_1623
Malate synthase; Belongs to the malate synthase family.
  
 
 0.803
pdhA
Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.783
OSCT_0066
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.781
OSCT_2715
D-lactate dehydrogenase (cytochrome).
  
  
 
0.779
OSCT_0110
Hypothetical protein.
    
 0.777
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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