Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0832Fumarate lyase. (474 aa)    
Predicted Functional Partners:
OSCT_2690
Arginase; Belongs to the arginase family.
   
 0.916
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
   
 0.916
OSCT_1303
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
  
 0.900
OSCT_2945
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
  
 
 0.882
OSCT_1297
Aminotransferase class I and II.
    
 0.880
OSCT_2969
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
   
 0.852
OSCT_2946
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
  0.849
OSCT_2740
Malate dehydrogenase.
  
 
 0.848
OSCT_2944
Succinate dehydrogenase/fumarate reductase cytochrome b subunit.
     
 0.836
OSCT_1988
Hypothetical protein.
    
  0.823
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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