STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0848Polysaccharide deacetylase. (584 aa)    
Predicted Functional Partners:
OSCT_0851
Hypothetical protein.
  
 
 0.829
OSCT_0852
Glycosyl transferase, group 1.
     
 0.636
OSCT_0849
ABC-2 type transporter.
       0.627
OSCT_0850
ABC transporter related protein.
       0.627
OSCT_0719
Hypothetical protein.
  
 
 0.606
OSCT_0720
Glycosyl transferase, group 2 family protein.
  
 
 0.606
OSCT_0847
Spermidine synthase-like protein.
  
  
 0.585
OSCT_0846
Protein of unknown function YGGT.
       0.565
OSCT_0026
Glycosyl transferase family 2.
  
 
 0.536
OSCT_0433
Glycosyl transferase family protein.
  
 
 0.536
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.