STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0856Hypothetical protein. (378 aa)    
Predicted Functional Partners:
OSCT_2341
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.842
OSCT_0855
Hypothetical protein.
       0.773
OSCT_0851
Hypothetical protein.
  
  
 0.746
OSCT_0857
Hypothetical protein.
       0.741
OSCT_0858
Hypothetical protein.
       0.741
OSCT_0852
Glycosyl transferase, group 1.
  
  
 0.740
OSCT_0853
Glycosyl transferase family protein.
  
    0.720
OSCT_0854
Glycosyl transferase family protein.
       0.714
OSCT_0859
FG-GAP repeat protein.
       0.673
OSCT_0850
ABC transporter related protein.
    
 0.644
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.