STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
OSCT_0870Asparagine synthase (glutamine-hydrolyzing). (630 aa)    
Predicted Functional Partners:
OSCT_0551
Glutamate synthase (ferredoxin).
  
 
 0.909
OSCT_2572
Asparaginase/glutaminase.
     
 0.898
OSCT_0869
Glycosyl transferase, group 1.
 
     0.866
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.821
OSCT_0743
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.817
OSCT_0872
Glycosyl transferase group 1.
 
     0.812
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.804
OSCT_2747
Asparagine synthase (glutamine-hydrolyzing).
  
  
 
0.791
OSCT_1149
Asparaginase.
     
 0.787
OSCT_1303
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
 0.783
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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