STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0872Glycosyl transferase group 1. (384 aa)    
Predicted Functional Partners:
OSCT_0869
Glycosyl transferase, group 1.
 
    
0.812
OSCT_0870
Asparagine synthase (glutamine-hydrolyzing).
 
     0.812
OSCT_0873
Glycosyl transferase family protein.
  
    0.787
OSCT_0871
Hypothetical protein.
       0.773
OSCT_0854
Glycosyl transferase family protein.
  
     0.747
OSCT_1153
Methyltransferase type 11.
  
     0.597
OSCT_0868
Methyltransferase type 12.
 
     0.592
OSCT_3098
Glycosyl transferase group 1.
  
     0.558
OSCT_2201
Hypothetical protein.
  
    0.547
OSCT_0874
Pyridoxamine 5'-phosphate oxidase-related FMN-binding.
       0.520
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.