STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0874Pyridoxamine 5'-phosphate oxidase-related FMN-binding. (134 aa)    
Predicted Functional Partners:
OSCT_2563
Luciferase family protein.
  
     0.728
OSCT_1179
Hypothetical protein.
  
     0.594
OSCT_1132
Luciferase-like monooxygenase.
  
     0.588
OSCT_1717
Hypothetical protein.
  
  
  0.565
OSCT_1313
F420-dependent oxidoreductase.
  
     0.558
OSCT_0871
Hypothetical protein.
       0.520
OSCT_0872
Glycosyl transferase group 1.
       0.520
OSCT_0873
Glycosyl transferase family protein.
       0.520
OSCT_0870
Asparagine synthase (glutamine-hydrolyzing).
       0.514
fbiD
Hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
     0.506
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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