STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0899Carbonate dehydratase. (222 aa)    
Predicted Functional Partners:
OSCT_2523
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit-2.
    
 0.927
OSCT_1363
Sulphate transporter.
 
 
 0.863
OSCT_0900
Succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.594
OSCT_2904
Sulphate transporter.
 
 
 0.572
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.563
OSCT_2244
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.563
OSCT_3200
GCN5-related N-acetyltransferase.
    
  0.524
OSCT_2522
Ribulose bisophosphate carboxylase; Belongs to the RuBisCO large chain family.
    
 
 0.413
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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