STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0914Hypothetical protein. (708 aa)    
Predicted Functional Partners:
OSCT_0971
Hypothetical protein.
  
     0.755
OSCT_2565
Hypothetical protein.
 
     0.752
OSCT_0540
Hypothetical protein.
  
     0.742
OSCT_1726
Hypothetical protein.
 
     0.739
OSCT_1282
Hypothetical protein.
 
     0.737
OSCT_2685
AAA-4 family protein.
 
     0.735
OSCT_1105
Hypothetical protein.
  
    0.729
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
 
 
 
 0.729
OSCT_0487
O-antigen polymerase.
  
     0.722
OSCT_0681
Peptidase C60 sortase A and B.
  
     0.721
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.