STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0937Phospholipase/carboxylesterase. (215 aa)    
Predicted Functional Partners:
OSCT_0938
Peptidoglycan-binding LysM.
       0.801
OSCT_0729
Hypothetical protein.
     
 0.792
OSCT_0936
Phospholipase D/transphosphatidylase.
     
 0.774
OSCT_2395
Hypothetical protein.
   
 0.717
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.697
OSCT_0940
Colicin V production protein.
       0.487
OSCT_1839
Patatin.
 
  
 0.461
OSCT_0942
SNF2-related helicase.
  
   0.446
OSCT_2875
Glycerophosphoryl diester phosphodiesterase.
    
 0.443
OSCT_2015
Peptidase M14 carboxypeptidase A.
  
     0.405
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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