STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0943Hypothetical protein. (423 aa)    
Predicted Functional Partners:
OSCT_1881
AAA ATPase central domain protein; Belongs to the AAA ATPase family.
   
 0.857
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.663
OSCT_0996
Hypothetical protein.
  
  
 
0.574
OSCT_0942
SNF2-related helicase.
       0.561
OSCT_0941
Hypothetical protein.
       0.550
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.549
OSCT_2073
Mov34/MPN/PAD-1 family protein.
   
  0.542
OSCT_2189
Lytic transglycosylase catalytic.
  
  
 0.542
OSCT_1416
Two-component hybrid sensor and regulator.
  
  
 0.495
OSCT_2834
Two-component hybrid sensor and regulator.
  
  
 0.495
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.