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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0955ABC-type dipeptide transport system periplasmic component-like protein. (641 aa)    
Predicted Functional Partners:
OSCT_0954
Binding-protein-dependent transport systems inner membrane component.
 
 0.845
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
    0.839
OSCT_0953
Binding-protein-dependent transport systems inner membrane component.
 
 0.744
OSCT_2533
Binding-protein-dependent transport systems inner membrane component.
 
 0.702
OSCT_1818
Hypothetical protein.
  
     0.690
OSCT_0951
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
 0.652
OSCT_1872
OsmC family protein.
  
     0.643
OSCT_0952
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
 
 0.640
OSCT_2012
Chromosome segregation ATPase-like protein.
  
     0.612
OSCT_2532
Binding-protein-dependent transport systems inner membrane component.
 
 0.607
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.