STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0964ABC transporter related protein. (256 aa)    
Predicted Functional Partners:
OSCT_0044
ABC-2 type transporter.
 
 0.966
OSCT_0965
Hypothetical protein.
 
    0.933
OSCT_1919
ABC transporter related protein.
 
 
0.905
OSCT_0735
ABC-2 type transporter.
  
 0.790
OSCT_2151
ABC transporter related protein.
 
  
 
0.731
OSCT_0963
Response regulator receiver.
       0.664
OSCT_1069
ABC-2 type transporter.
 
 0.618
OSCT_0702
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
  0.598
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.552
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.539
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.