STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0964ABC transporter related protein. (256 aa)    
Predicted Functional Partners:
OSCT_0044
ABC-2 type transporter.
 
 0.968
OSCT_0965
Hypothetical protein.
 
    0.932
OSCT_1919
ABC transporter related protein.
 
 
0.901
OSCT_2151
ABC transporter related protein.
 
    
0.718
OSCT_0735
ABC-2 type transporter.
  
 0.679
OSCT_1692
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD.
     
  0.679
OSCT_0963
Response regulator receiver.
       0.664
OSCT_1069
ABC-2 type transporter.
 
 
 0.642
OSCT_0702
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
  0.589
OSCT_0966
Regulatory protein, FmdB family.
       0.522
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.