STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0989LmbE family protein. (246 aa)    
Predicted Functional Partners:
OSCT_0990
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.701
OSCT_0991
Alpha/beta hydrolase fold-containing protein.
   
   0.696
OSCT_0510
Hypothetical protein.
  
     0.656
OSCT_0511
Hypothetical protein.
  
     0.641
OSCT_3118
Hypothetical protein.
 
  
 0.624
OSCT_2896
Glycosyl transferase group 1.
  
 
  0.466
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.460
OSCT_1661
Protein of unknown function DUF58.
  
     0.445
OSCT_1747
Hypothetical protein.
  
     0.439
OSCT_0241
Ribokinase-like domain-containing protein.
  
  
 0.435
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.