STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1012Hypothetical protein. (907 aa)    
Predicted Functional Partners:
OSCT_3164
Response regulator receiver.
  
  
 0.966
OSCT_2703
Multi-sensor hybrid histidine kinase.
 
  
 0.877
OSCT_0029
Response regulator receiver protein.
  
  
 0.875
OSCT_2430
CheA signal transduction histidine kinase.
  
  
 0.875
OSCT_0811
Hypothetical protein.
  
  
 0.847
OSCT_2613
Hypothetical protein.
  
  
 0.837
OSCT_0222
Multi-sensor signal transduction histidine kinase.
  
  
 0.822
OSCT_1257
Periplasmic sensor hybrid histidine kinase.
  
  
 0.811
OSCT_1011
Hypothetical protein.
 
  
  0.721
OSCT_1437
TPR repeat-containing protein.
  
     0.714
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.