STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1053Hypothetical protein. (604 aa)    
Predicted Functional Partners:
OSCT_0580
Hypothetical protein.
  
     0.767
OSCT_1248
Peptidase C1A papain.
  
     0.646
OSCT_0859
FG-GAP repeat protein.
  
     0.608
OSCT_1769
Hypothetical protein.
  
     0.548
OSCT_0059
Alpha-L-arabinofuranosidase-like protein.
  
     0.503
OSCT_0769
Hypothetical protein.
  
     0.495
OSCT_0768
Hypothetical protein.
  
     0.471
OSCT_1054
YceI family protein; Belongs to the UPF0312 family.
       0.421
OSCT_3185
WD40 repeat, subgroup.
  
     0.409
OSCT_0910
Peptidase S8 and S53 subtilisin kexin sedolisin.
  
     0.406
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.