STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1068Daunorubicin resistance ABC transporter ATPase subunit. (315 aa)    
Predicted Functional Partners:
OSCT_0044
ABC-2 type transporter.
 
 0.973
OSCT_1069
ABC-2 type transporter.
 
 
 0.971
OSCT_0952
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
   
 
0.798
OSCT_1067
Hypothetical protein.
  
    0.798
OSCT_0617
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
  0.756
OSCT_0702
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
  0.745
OSCT_0735
ABC-2 type transporter.
  
 0.679
OSCT_1692
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD.
     
  0.679
OSCT_0982
Heme exporter protein CcmA.
 
  
 
0.428
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.415
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.