STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1082Alpha/beta hydrolase fold protein. (330 aa)    
Predicted Functional Partners:
OSCT_1072
Alpha/beta hydrolase fold protein.
 
     0.801
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.778
OSCT_1081
Hypothetical protein.
       0.774
OSCT_3022
Alpha/beta hydrolase fold protein.
  
     0.774
OSCT_0471
Alpha/beta hydrolase fold-containing protein.
  
     0.772
OSCT_1083
Anion-transporting ATPase.
 
     0.771
OSCT_2629
Alpha/beta hydrolase fold-containing protein.
  
     0.767
OSCT_2567
Alpha/beta hydrolase fold protein.
  
     0.761
OSCT_0603
Alpha/beta hydrolase fold protein.
  
     0.744
OSCT_3092
Alpha/beta hydrolase fold-containing protein.
  
     0.700
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.