STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1083Anion-transporting ATPase. (366 aa)    
Predicted Functional Partners:
OSCT_1082
Alpha/beta hydrolase fold protein.
 
     0.771
OSCT_1084
Arsenite-transporting ATPase.
 
    
0.714
OSCT_1081
Hypothetical protein.
       0.707
OSCT_1080
Hypothetical protein.
       0.545
OSCT_1079
Putative lipase.
 
     0.508
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
    
   0.508
OSCT_1078
Putative lipase.
 
     0.499
OSCT_2073
Mov34/MPN/PAD-1 family protein.
  
   0.499
OSCT_1085
Hypothetical protein.
       0.446
OSCT_1088
Arsenite-activated ATPase ArsA.
 
    
0.415
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.