Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_1094Methyltransferase type 11. (287 aa)    
Predicted Functional Partners:
OSCT_0507
Beta-ketoacyl synthase.
   
 0.799
OSCT_1093
Response regulator receiver modulated metal dependent phosphohydrolase.
       0.773
OSCT_2837
Methyltransferase type 11.
  
     0.557
OSCT_1480
Hypothetical protein.
 
     0.542
OSCT_1734
Hypothetical protein.
  
  
  0.528
OSCT_2442
Hypothetical protein.
  
     0.498
OSCT_3039
Phospholipid/glycerol acyltransferase.
  
  
  0.470
OSCT_0620
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.466
OSCT_1720
Hypothetical protein.
  
     0.462
OSCT_1092
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
       0.455
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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