STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1101Hypothetical protein. (487 aa)    
Predicted Functional Partners:
OSCT_0470
Putative WD-repeat containing protein.
 
     0.627
OSCT_1779
Signal transduction protein with Nacht domain.
  
     0.606
OSCT_1102
Hypothetical protein.
 
     0.592
OSCT_0061
Hypothetical protein.
 
     0.544
OSCT_1769
Hypothetical protein.
  
     0.531
OSCT_1200
Hypothetical protein.
  
     0.530
OSCT_1099
Glycosyl transferase family protein.
       0.488
OSCT_1098
Hypothetical protein.
       0.487
OSCT_1100
Hypothetical protein.
       0.487
OSCT_1860
WD-40 repeat-containing protein.
 
     0.455
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.