Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OSCT_1108Transcriptional activator domain protein. (1170 aa)    
Predicted Functional Partners:
OSCT_0525
Aminotransferase class I and II.
    
   0.734
OSCT_0507
Beta-ketoacyl synthase.
 
   
 0.686
OSCT_1153
Methyltransferase type 11.
  
     0.671
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.669
OSCT_0917
Hypothetical protein.
  
     0.619
OSCT_2201
Hypothetical protein.
  
     0.596
OSCT_0851
Hypothetical protein.
  
     0.594
OSCT_1107
Serine/threonine protein kinase.
   
   0.593
OSCT_2565
Hypothetical protein.
  
     0.585
OSCT_1282
Hypothetical protein.
  
     0.579
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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