Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_1130ATPase domain-containing protein. (678 aa)    
Predicted Functional Partners:
OSCT_1129
Two component transcriptional regulator, LuxR family.
 
  0.963
OSCT_2519
Two-component system response regulator.
 
  0.839
OSCT_1713
Two component transcriptional regulator, LuxR family.
  
  0.829
OSCT_2224
Two component transcriptional regulator, LuxR family.
  
  0.825
OSCT_2630
Multi-sensor signal transduction histidine kinase.
 
 0.822
OSCT_2235
Two component LuxR family transcriptional regulator.
  
  0.817
OSCT_0495
Response regulator receiver.
  
  0.816
OSCT_1232
Two component LuxR family transcriptional regulator.
  
  0.816
OSCT_1461
Two component LuxR family transcriptional regulator.
  
  0.816
OSCT_2464
Two component LuxR family transcriptional regulator.
  
  0.816
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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