Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1193Hypothetical protein. (354 aa)    
Predicted Functional Partners:
OSCT_1194
Hypothetical protein.
 
     0.942
OSCT_0392
Immunoglobulin I-set domain protein.
  
 0.910
OSCT_0556
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
  
 
 0.895
OSCT_2899
Glycosyl transferase family 2.
  
 0.864
OSCT_2395
Hypothetical protein.
    
 0.844
OSCT_2791
Hypothetical protein.
    
 0.841
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
 
 
   0.829
OSCT_2844
Histone deacetylase superfamily.
    
 
 0.750
OSCT_2022
SNF2-related helicase.
    
 0.749
OSCT_0507
Beta-ketoacyl synthase.
   
 0.719
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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