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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1194Hypothetical protein. (329 aa)    
Predicted Functional Partners:
OSCT_1193
Hypothetical protein.
 
     0.942
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
 
     0.851
OSCT_1704
Rare lipoprotein A.
  
     0.636
OSCT_1179
Hypothetical protein.
  
     0.587
OSCT_1540
Hypothetical protein.
  
     0.457
OSCT_3139
YD repeat-containing protein.
  
     0.440
OSCT_0852
Glycosyl transferase, group 1.
  
     0.429
OSCT_2104
Peptidase S8 and S53 subtilisin kexin sedolisin.
  
     0.420
OSCT_0997
Hypothetical protein.
  
     0.416
OSCT_1701
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.408
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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