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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1222Transcriptional regulator, Crp/Fnr family. (226 aa)    
Predicted Functional Partners:
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.926
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.919
OSCT_1993
Cyclic nucleotide-binding protein.
  
  
  0.901
OSCT_3007
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
 0.793
OSCT_1227
PAS sensor protein.
   
 0.738
OSCT_2606
Response Regulator Receiver Signal Transduction Histidine Kinase.
 
  
   0.719
OSCT_2071
Adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
 
 0.709
OSCT_0570
Cobalamin B12-binding domain-containing protein.
 
   
  0.704
OSCT_2849
Response regulator receiver.
 
 0.671
OSCT_1310
PAS fold family protein.
   
 0.649
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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