Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1241L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (329 aa)    
Predicted Functional Partners:
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.877
OSCT_2969
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.793
OSCT_1909
NADH dehydrogenase (quinone).
     
  0.768
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
   
 
  0.758
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
   
 
  0.758
OSCT_1424
AMP-dependent synthetase and ligase.
  
 
 0.754
ftsH-2
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.631
OSCT_3002
Pyruvate carboxyltransferase.
 
  0.630
OSCT_1900
Hypothetical protein.
  
 
 0.604
OSCT_1848
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
  
 0.563
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (16%) [HD]