OSCT_1243 protein (Oscillochloris trichoides)

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Score

OSCT_1243

ABC transporter, ATP-binding protein. (626 aa)

Predicted Functional Partners:

rplD

0.806

rplT

0.804

rpsC

0.800

rpsG

0.795

rplC

0.794

rpmD

0.793

rpsO

0.793

rplM

0.788

OSCT_2143

0.788

rpsD

0.787

Your Current Organism:

Oscillochloris trichoides

NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OSCT_1243	OSCT_2143	OSCT_1243	OSCT_2143	ABC transporter, ATP-binding protein.	Ribosomal protein L27.	0.788
OSCT_1243	rplC	OSCT_1243	OSCT_0199	ABC transporter, ATP-binding protein.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.794
OSCT_1243	rplD	OSCT_1243	OSCT_0198	ABC transporter, ATP-binding protein.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.806
OSCT_1243	rplM	OSCT_1243	OSCT_0172	ABC transporter, ATP-binding protein.	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.788
OSCT_1243	rplT	OSCT_1243	OSCT_2584	ABC transporter, ATP-binding protein.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.804
OSCT_1243	rpmD	OSCT_1243	OSCT_0182	ABC transporter, ATP-binding protein.	Ribosomal protein L30.	0.793
OSCT_1243	rpsC	OSCT_1243	OSCT_0193	ABC transporter, ATP-binding protein.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.800
OSCT_1243	rpsD	OSCT_1243	OSCT_0176	ABC transporter, ATP-binding protein.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.787
OSCT_1243	rpsG	OSCT_1243	OSCT_0204	ABC transporter, ATP-binding protein.	Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.795
OSCT_1243	rpsO	OSCT_1243	OSCT_1128	ABC transporter, ATP-binding protein.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.793
OSCT_2143	OSCT_1243	OSCT_2143	OSCT_1243	Ribosomal protein L27.	ABC transporter, ATP-binding protein.	0.788
OSCT_2143	rplC	OSCT_2143	OSCT_0199	Ribosomal protein L27.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.991
OSCT_2143	rplD	OSCT_2143	OSCT_0198	Ribosomal protein L27.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.989
OSCT_2143	rplM	OSCT_2143	OSCT_0172	Ribosomal protein L27.	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.993
OSCT_2143	rplT	OSCT_2143	OSCT_2584	Ribosomal protein L27.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.991
OSCT_2143	rpmD	OSCT_2143	OSCT_0182	Ribosomal protein L27.	Ribosomal protein L30.	0.974
OSCT_2143	rpsC	OSCT_2143	OSCT_0193	Ribosomal protein L27.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.980
OSCT_2143	rpsD	OSCT_2143	OSCT_0176	Ribosomal protein L27.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.990
OSCT_2143	rpsG	OSCT_2143	OSCT_0204	Ribosomal protein L27.	Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.989
OSCT_2143	rpsO	OSCT_2143	OSCT_1128	Ribosomal protein L27.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.991

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