STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1244CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (201 aa)    
Predicted Functional Partners:
OSCT_0496
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
  0.943
OSCT_1567
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
 
 0.852
OSCT_0837
Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).
  
 
 0.826
OSCT_1245
Hypothetical protein.
       0.727
OSCT_1791
Response regulator receiver protein.
 
    0.681
OSCT_2473
Helix-turn-helix domain-containing protein.
  
    0.631
OSCT_2498
Phosphatidylserine decarboxylase-related protein.
   
 0.627
OSCT_2875
Glycerophosphoryl diester phosphodiesterase.
  
 0.566
OSCT_1246
Cyclic nucleotide-regulated small mechanosensitive ion channel.
       0.536
OSCT_1247
Hypothetical protein.
       0.536
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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