Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
OSCT_1250Membrane-flanked domain protein. (229 aa)    
Predicted Functional Partners:
OSCT_1249
Inosine guanosine and xanthosine phosphorylase family protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.809
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.784
OSCT_1248
Peptidase C1A papain.
 
     0.729
OSCT_0511
Hypothetical protein.
  
     0.678
OSCT_2791
Hypothetical protein.
  
     0.589
OSCT_0510
Hypothetical protein.
  
     0.576
OSCT_2685
AAA-4 family protein.
 
     0.574
OSCT_1252
Hypothetical protein.
  
    0.573
OSCT_2799
Hypothetical protein.
  
    0.556
OSCT_0604
Hypothetical protein.
  
     0.552
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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