STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1267SLEI family. (2038 aa)    
Predicted Functional Partners:
OSCT_3007
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
 0.828
OSCT_1227
PAS sensor protein.
   
 0.809
cobB
Silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
   
   0.795
OSCT_2849
Response regulator receiver.
 
 
 0.782
vapC-2
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.773
OSCT_1310
PAS fold family protein.
   
 0.751
OSCT_1950
TPR repeat-containing protein.
  
     0.740
OSCT_0739
Sensory box histidine kinase/response regulator.
   
 0.739
OSCT_2221
Multi-sensor hybrid histidine kinase.
   
 0.737
OSCT_2071
Adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
 
 
  0.711
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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