Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
OSCT_1285ABC-1 domain protein. (558 aa)    
Predicted Functional Partners:
OSCT_1284
Diacylglycerol kinase.
 
     0.725
OSCT_0039
Lycopene beta and epsilon cyclase.
   
 0.542
OSCT_2128
Lycopene beta and epsilon cyclase.
   
 0.542
OSCT_2899
Glycosyl transferase family 2.
  
 0.521
OSCT_1286
Glutamine synthetase catalytic region.
     
 0.511
OSCT_2657
single-stranded-DNA-specific exonuclease RecJ.
      0.443
OSCT_2107
Poly(hydroxyalkanoate) granule-associated protein.
 
     0.404
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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