STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1353Mg-protoporphyrin IX methyl transferase. (196 aa)    
Predicted Functional Partners:
OSCT_1354
Magnesium chelatase, H subunit.
 
 
 0.985
OSCT_0360
BchH; F288459_1 BchH.
 
 
 0.969
OSCT_1626
Magnesium chelatase, H subunit.
 
 
 0.962
OSCT_2341
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
 0.959
OSCT_2342
Magnesium chelatase ATPase subunit I; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.950
OSCT_0105
Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase.
  
 
  0.944
OSCT_0246
Magnesium chelatase.
  
 0.858
OSCT_1356
PUCC protein.
 
    0.821
OSCT_1076
Bacteriochlorophyll/chlorophyll synthetase.
 
  0.812
OSCT_2369
Bacteriochlorophyll/chlorophyll synthetase.
 
  0.812
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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