STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1372ErfK/YbiS/YcfS/YnhG family protein. (377 aa)    
Predicted Functional Partners:
OSCT_1373
Proprotein convertase P.
       0.762
OSCT_0487
O-antigen polymerase.
  
    0.640
OSCT_0970
Hypothetical protein.
  
     0.634
OSCT_1533
O-antigen polymerase.
  
    0.624
OSCT_0596
Glycosyl transferase family protein.
  
     0.571
OSCT_0476
O-antigen polymerase.
  
    0.562
OSCT_0429
Polysaccharide biosynthesis protein.
  
     0.532
OSCT_0897
DNA binding domain protein, excisionase family.
  
     0.498
OSCT_0441
HEAT repeat-containing PBS lyase.
  
     0.488
OSCT_0440
LmbE family protein.
  
     0.474
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.