STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1385Glycosyl transferase family 2. (318 aa)    
Predicted Functional Partners:
OSCT_2645
Glycosyl transferase family 2.
  
  
 
0.829
OSCT_0368
Glycosyl transferase family protein.
 
  
 
0.812
OSCT_1643
Glycosyl transferase family 4.
  
 
  0.811
OSCT_1386
Glycoside hydrolase family 2 TIM barrel.
       0.693
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.651
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.651
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.651
OSCT_1875
Glycosyl transferase family protein.
      0.628
OSCT_3098
Glycosyl transferase group 1.
 
 
    0.622
vapC-3
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.613
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.