STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1426ABC transporter related protein. (241 aa)    
Predicted Functional Partners:
OSCT_1427
Polar amino acid ABC transporter, inner membrane subunit.
 0.999
OSCT_1653
Polar amino acid ABC transporter, inner membrane subunit.
 0.988
OSCT_1654
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.947
OSCT_1428
Extracellular solute-binding protein.
 
 0.940
OSCT_1655
Extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.927
OSCT_0702
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.905
OSCT_0805
Hypothetical protein.
 
      0.899
OSCT_2273
Protein of unknown function DUF214.
 
      0.898
OSCT_2274
Hypothetical protein.
 
      0.898
OSCT_1329
Protein of unknown function DUF214.
 
      0.895
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.