STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1435Hypothetical protein. (218 aa)    
Predicted Functional Partners:
OSCT_3141
YD repeat protein.
  
 
 0.831
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.750
OSCT_1995
Peptidase C60 sortase A and B.
 
     0.703
OSCT_2679
FHA domain containing protein.
  
    0.686
OSCT_2823
ferredoxin--NADP(+) reductase.
 
     0.666
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
 
   
 0.653
OSCT_1437
TPR repeat-containing protein.
  
    0.633
OSCT_2791
Hypothetical protein.
  
     0.630
OSCT_2442
Hypothetical protein.
  
     0.622
OSCT_0652
Hypothetical protein.
  
     0.607
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.