STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1437TPR repeat-containing protein. (1060 aa)    
Predicted Functional Partners:
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
 
 
  0.865
OSCT_2791
Hypothetical protein.
  
 
  0.835
OSCT_2849
Response regulator receiver.
 
 
  0.790
OSCT_0783
Tetratricopeptide TPR_2 repeat protein.
 
 
  0.788
OSCT_1641
Alpha/beta hydrolase fold-containing protein.
  
 
   0.779
OSCT_2442
Hypothetical protein.
  
     0.775
OSCT_1438
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.774
OSCT_2444
Membrane protein-like protein.
  
     0.772
OSCT_2680
Hypothetical protein.
  
     0.770
OSCT_2685
AAA-4 family protein.
  
     0.770
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.