STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1453Hypothetical protein. (399 aa)    
Predicted Functional Partners:
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.778
OSCT_1454
Hypothetical protein.
       0.773
OSCT_2173
acyl-coA-binding protein ACBP.
  
 
  0.690
OSCT_3040
NAD-dependent epimerase/dehydratase.
  
     0.667
OSCT_3039
Phospholipid/glycerol acyltransferase.
  
   0.647
OSCT_0388
Phospholipid/glycerol acyltransferase.
  
   0.614
OSCT_2105
Patatin.
 
  
  0.594
OSCT_0507
Beta-ketoacyl synthase.
  
 0.563
OSCT_1424
AMP-dependent synthetase and ligase.
  
 0.528
OSCT_1455
Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.516
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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