Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_1474Diguanylate cyclase. (382 aa)    
Predicted Functional Partners:
OSCT_1578
Putative PAS/PAC sensor protein.
 0.987
OSCT_1093
Response regulator receiver modulated metal dependent phosphohydrolase.
 
  
 0.977
OSCT_1227
PAS sensor protein.
 
 0.964
OSCT_2835
Response regulator receiver modulated metal dependent phosphohydrolase.
 
  
 0.956
OSCT_1231
Response regulator receiver modulated metal dependent phosphohydrolase.
 
  
 0.949
OSCT_1310
PAS fold family protein.
 
 0.948
OSCT_0739
Sensory box histidine kinase/response regulator.
 
 0.943
OSCT_1309
Response regulator receiver.
 
 
    0.914
OSCT_1228
Multi-sensor signal transduction histidine kinase.
  
 0.909
OSCT_1936
Signal transduction histidine kinase.
 
  
 0.905
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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