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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1477Hypothetical protein. (524 aa)    
Predicted Functional Partners:
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.961
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.931
OSCT_2317
Dihydroxyacetone kinase, phosphotransfer subunit.
    
  0.903
OSCT_3027
Protein of unknown function DUF162.
 
 
 0.702
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
 
 
 0.700
OSCT_3026
Iron-sulfur cluster binding protein.
  
 0.700
OSCT_2969
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.685
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 
 0.659
OSCT_1478
Hypothetical protein.
       0.627
OSCT_2315
Anaerobic glycerol-3-phosphate dehydrogenase subunit B.
 
 
 0.595
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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