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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1482TPR repeat-containing protein. (277 aa)    
Predicted Functional Partners:
OSCT_1035
Cell wall hydrolase/autolysin.
 
   0.873
OSCT_1405
Sec-independent translocation protein mttA/Hcf106.
   
 
 0.812
OSCT_0741
Hypothetical protein.
  
     0.681
OSCT_1481
Peptidase M23B.
 
     0.666
OSCT_1437
TPR repeat-containing protein.
  
     0.655
OSCT_2791
Hypothetical protein.
  
 
 
 0.616
OSCT_0604
Hypothetical protein.
 
     0.606
OSCT_2134
Band 7 protein.
  
 0.570
OSCT_2129
Hypothetical protein.
  
     0.564
OSCT_1924
Hypothetical protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.562
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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