STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1490Rieske (2Fe-2S) domain-containing protein. (100 aa)    
Predicted Functional Partners:
OSCT_2998
Hypothetical protein.
  
 
 0.956
OSCT_0551
Glutamate synthase (ferredoxin).
  
 
 0.919
OSCT_2169
AD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 0.907
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 
 0.894
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 
 0.894
OSCT_1359
uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
  
 0.866
OSCT_1491
Rhodanese domain-containing protein.
    
  0.810
OSCT_0472
Cytochrome c class I.
    
 0.804
OSCT_2596
Cytochrome c oxidase, subunit II.
    
 0.804
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
   
 
  0.793
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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