STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1491Rhodanese domain-containing protein. (285 aa)    
Predicted Functional Partners:
OSCT_2601
Cystathionine gamma-synthase.
 
 
 0.868
OSCT_0542
Aminotransferase class V.
  
 0.863
OSCT_0655
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.840
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.811
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.811
OSCT_1490
Rieske (2Fe-2S) domain-containing protein.
    
  0.810
OSCT_2365
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.807
OSCT_0525
Aminotransferase class I and II.
     
  0.798
OSCT_2145
Thiosulfate sulfurtransferase.
  
  
 
0.783
OSCT_2074
UBA/THIF-type NAD/FAD binding protein.
  
 0.774
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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