Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1522Hypothetical protein. (116 aa)    
Predicted Functional Partners:
OSCT_1519
Electron transfer flavoprotein alpha/beta-subunit.
 
 0.991
OSCT_1520
Electron transfer flavoprotein alpha subunit.
 
 0.990
OSCT_1521
Electron-transferring-flavoprotein dehydrogenase.
 
 
 0.988
OSCT_2621
Electron transfer flavoprotein alpha/beta-subunit.
 
 0.938
OSCT_2622
Electron transfer flavoprotein alpha subunit.
 
 0.936
OSCT_3106
Geranylgeranyl reductase.
 
 
 0.841
OSCT_1900
Hypothetical protein.
  
 
 0.618
OSCT_0336
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.611
OSCT_1424
AMP-dependent synthetase and ligase.
  
 
 0.533
OSCT_1909
NADH dehydrogenase (quinone).
  
  
 0.450
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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